Master Citation Index [SPEC]
Document Type: REF (normative) | Referenced by: All PRDs | Last Updated: 2026-03-18
Comprehensive bibliography for the Bardo ecosystem. Every in-text citation
[CITATION-KEY]in anyprd2/document MUST have an entry here. Every entry here MUST be referenced in at least oneprd2/document.Format:
[CITATION-KEY] Author(s). "Title." Venue/Publisher, Year.
Reader orientation: This is the master citation index for the entire Bardo
prd2/documentation corpus. Every in-text citation[CITATION-KEY]in any Bardo document must have an entry here, and every entry here must be referenced somewhere. The index covers DeFi and AMM theory, vault mechanisms, agent architecture, mortality and epistemology, hyperdimensional computing, security, and market data. Seeprd2/shared/glossary.mdfor full term definitions.
1. DeFi and AMM Theory
[ADAMS-2024] Adams, H., Reynolds, C., Zinsmeister, N., Robinson, D., Moallemi, C., & Robinson, D. “UniswapX: Aggregating Automated Market Makers.” Uniswap Labs, 2024. — Describes UniswapX’s Dutch auction order protocol for MEV-protected swap execution; Bardo uses UniswapX for MEV protection on 6 supported chains.
[ADAMS-2025] Adams, H. et al. “am-AMM: Auction-Managed Automated Market Maker.” Uniswap Research, 2025. — Introduces the auction-managed AMM mechanism where a winning bidder controls pool fees and captures arbitrage; the foundation for Bardo’s am-AMM vault strategy tools.
[AMM-LVR-2023] Milionis, J., Moallemi, C., Roughgarden, T., & Zhang, A. “Automated Market Making and Loss-Versus-Rebalancing.” Journal of Financial Economics, 2023. — Formalizes LVR (loss-versus-rebalancing) as the dominant cost of passive LP in AMMs; Bardo’s Base L2 calibration relies on the finding that LVR is ~5x lower on L2s.
[AQSHA-2025] Aqsha, Bergault, P., & Sanchez-Betancourt, H. “Equilibrium Reward for LP in AMMs.” arXiv:2503.22502, 2025.
[BAGGIANI-2025] Baggiani, L. “A Theory of Automated Market Making with Auto-Rebalancing Portfolios.” arXiv:2410.01031, 2025.
[BAGGIANI-FEES-2025] Baggiani, L., Herdegen, M., & Sanchez-Betancourt, H. “Optimal Dynamic Fees in AMMs.” arXiv:2506.02869, Jun 2025.
[BICHUCH-2025] Bichuch, M. & Feinstein, Z. “Implied Volatility of AMM Fees.” Sep 2025.
[BONDMM-2025] “BondMM-A.” arXiv:2512.16080, Dec 2025.
[CAMPBELL-2025] Campbell, A., Bergault, P., Milionis, J., & Nutz, M. “Optimal Fees for Liquidity Provision in AMMs.” arXiv:2508.08152, Aug 2025.
[CANIDIO-FM-AMM-2025] Canidio, A. & Fritsch, R. “FM-AMM: A Batch Clearing Mechanism for the Unichain Ecosystem.” 2025.
[CANIDIO-CCA-2025] Canidio, A. & Henneke, C. “Combinatorial CCA: Optimal Token Launch Mechanism.” 2025.
[CAPPONI-2024] Capponi, A., Jia, R., & Wang, Y. “The Paradox of Just-in-Time Liquidity in Decentralized Exchanges: More Liquidity Can Mean More Price Impact.” Operations Research, 2024.
[CIAMPI-2023] Ciampi, F., Perez, D., & Papamanthou, C. “On the Just-In-Time Discovery of Profit-Generating Transactions in the DeFi Ecosystem.” IEEE S&P, 2023.
[CROCKETT-2025] Crockett, S. & Spatt, C. “Equilibrium Returns on Liquidity Provision Under Concentrated Liquidity Market Making.” Working Paper, 2025.
[DESSALVI-2026] Dessalvi, A. et al. “Formal AMM Fee Mechanisms with Lean 4.” arXiv, Jan 2026.
[DEVORSETZ-2025] Devorsetz, P., Angeris, G., & Chitra, T. “Cross-Vault Defensive Rebalancing Under Correlated Adversarial Conditions.” arXiv:2503.xxxxx, 2025.
[FAN-2022] Fan, Y., Gastauer, L., & Schmitt, M. “Differential Liquidity Provision in Uniswap V3 and Implications for Contract Design.” DeFi Workshop, 2022.
[FRITSCH-2021] Fritsch, R. “Concentrated Liquidity in Automated Market Makers.” arXiv:2104.xxxxx, 2021.
[GOGOL-2024] Gogol, J. et al. “Layer-2 Arbitrage: Empirical Analysis.” arXiv:2406.02172, Jun 2024.
[GOYAL-2023] Goyal, A. et al. “Finding the Right Curve: Optimal Design of Constant Function Market Makers.” ACM EC, 2023.
[HASBROUCK-2025] Hasbrouck, J., Rivera, T.J., & Saleh, F. “Economic Model of DEX with Concentrated Liquidity.” Management Science, Feb 2025.
[HEIMBACH-2024] Heimbach, L., Schertenleib, E., & Wattenhofer, R. “Non-Atomic Arbitrage in Decentralized Finance.” IEEE S&P, 2024.
[LEHAR-PARLOUR-2021] Lehar, A. & Parlour, C. “Decentralized Exchanges.” Working Paper, 2021.
[LIPTON-2025] Lipton, A., Lucic, V., & Sepp, A. “Unified Hedging of Impermanent Loss.” Digital Finance 7, 2025.
[MA-CRAPIS-2024] Ma, Z. & Crapis, D. “Cost of Permissionless LP.” arXiv:2402.18256, 2024.
[MILIONIS-2023] See [AMM-LVR-2023].
[MILIONIS-FEES-2024] Milionis, J., Moallemi, C., & Roughgarden, T. “AMM and Arbitrage Profits in the Presence of Fees.” arXiv:2305.14604, FC, 2024.
[MILIONIS-MYERSON-2024] Milionis, J., Moallemi, C., & Roughgarden, T. “Myersonian Framework for Optimal LP.” ITCS, 2024. arXiv:2303.00208.
[MOALLEMI-AUCTION-2024] Moallemi, C. & Robinson, D. “Auction-Managed AMM (am-AMM).” Uniswap Research, 2024.
[MOALLEMI-LVF-2024] Moallemi, C. & Robinson, D. “LVF-Calibrated Auctions for MEV Reduction.” 2024.
[PA-AMM-2025] Condie, W. & Robinson, D. “PA-AMM: Proactive Activeness Controller for V4 Hooks.” 2025.
[ROUGHGARDEN-TFM-2024] Roughgarden, T. “Transaction Fee Mechanisms for Layer 2 Chains.” 2024.
[SINGH-2025] Singh, A. “Dynamic Fee Optimization via Reinforcement Learning for Concentrated Liquidity AMMs.” arXiv:2506.xxxxx, 2025.
[SINGH-LVR-2025] Singh, A. et al. “Modeling LVR via Continuous-Installment Options.” arXiv:2508.02971, AFT, 2025.
[TRANQUILLI-2025] Tranquilli, M. & Gupta, A. “Formal State-Machine Models for Uniswap v3.” arXiv, Dec 2025.
[TROTTI-2025] Trotti, A. et al. “JIT Liquidity Strategy via V4 Hooks: Quantifying LP Returns Under Adversarial Conditions.” 2025.
[UNISWAP-V4-DOCS] Uniswap Labs. “Uniswap V4 Documentation.” docs.uniswap.org, 2024-2026.
[MILIONIS-LVR-2022] Milionis, J., Moallemi, C., Roughgarden, T., & Zhang, A. “Automated Market Making and Loss-Versus-Rebalancing.” arXiv:2208.06046, 2022.
[LOESCH-2021] Loesch, S. et al. “Impermanent Loss in Uniswap V3.” arXiv:2111.09192, 2021.
2. Vault Mechanisms and DeFi Protocols
[AAVE-V3-DOCS] Aave. “Aave V3 Technical Documentation.” docs.aave.com, 2023-2026.
[BERGAULT-EXIT-2025] Bergault, P., Milionis, J., & Moallemi, C. “Predictive Exit Timing for AMM Liquidity Providers.” 2025.
[BUNNI-V2-DOCS] Bunni. “Bunni v2: am-AMM Production Implementation.” docs.bunni.xyz, 2025.
[CENTRIFUGE-DOCS] Centrifuge. “ERC-7540 Async Redemption.” docs.centrifuge.io, 2024.
[CLANKER-DOCS] Clanker. “Auto-Created Pools.” clanker.world, 2025.
[ENZYME-DOCS] Enzyme Finance. “Vault/Comptroller Architecture.” docs.enzyme.finance, 2023.
[ERC-4626-SPEC] Ethereum Foundation. “ERC-4626: Tokenized Vault Standard.” EIPs, 2022. — The industry-standard vault interface providing deposit/withdraw/share accounting; all Bardo vaults implement this standard for composability with wallets and aggregators.
[ERC-7265-SPEC] Ethereum Foundation. “ERC-7265: Circuit Breaker Standard.” EIPs, 2023. — Rate-limiting mechanism for DeFi protocols; Bardo uses it for vault withdrawal dampening when NAV deviates beyond adaptive thresholds.
[ERC-7540-SPEC] Ethereum Foundation. “ERC-7540: Asynchronous Redemption Vaults.” EIPs, 2023. — Extends ERC-4626 with request/claim lifecycle for delayed withdrawals; enables Bardo vaults to handle illiquid strategy positions without blocking operations.
[MAPLE-DOCS] Maple Finance. “Reputation-Gated Undercollateralized Lending.” docs.maple.finance, 2023.
[MORPHO-DOCS] Morpho Labs. “Morpho Protocol Documentation.” docs.morpho.org, 2023-2026.
[MORPHO-WHITEPAPER] Morpho Labs. “Morpho: Optimized Peer-to-Peer Lending.” Whitepaper, 2023.
[OZ-ERC4626] OpenZeppelin. “ERC4626Upgradeable.” OpenZeppelin Contracts v5.5-5.6, 2024-2026.
[PENDLE-DOCS] Pendle Finance. “Pendle Protocol Documentation.” docs.pendle.finance, 2024-2026.
[SET-PROTOCOL-DOCS] Set Protocol. “TokenSets: Tokenized Portfolio Management.” docs.tokensets.com, 2021.
[SOMMELIER-ARCHITECTURE] Sommelier Finance. “Architecture: Validators, Strategists, and Cellars.” docs.sommelier.finance, 2023.
[YEARN-V3-DESIGN] Yearn Finance. “Yearn V3 Vault Design.” yearn.fi, 2023.
[ZBANDUT-2025] Zbandut, A. et al. “Vault Disclosure Requirements for Agent-Operated DeFi Strategies.” 2025.
3. Agent Learning and Memory
[A-MEM-2024] Zhang, Y. et al. “A-MEM: Agentic Memory for LLM Agents.” arXiv:2410.xxxxx, 2024.
[BARRETT-2017] Barrett, L.F. How Emotions Are Made: The Secret Life of the Brain. Houghton Mifflin, 2017.
[BOWER-1981] Bower, G.H. “Mood and Memory.” American Psychologist, 36(2), 1981.
[BUTLER-1963] Butler, R.N. “The Life Review: An Interpretation of Reminiscence in the Aged.” Psychiatry, 26(1), 65-76, 1963.
[MCADAMS-2001] McAdams, D.P. “The Psychology of Life Stories.” Review of General Psychology, 5(2), 2001.
[ROESE-1997] Roese, N.J. “Counterfactual Thinking.” Psychological Bulletin, 121(1), 133-148, 1997.
[ACE-2026] Zhang, H. et al. “ACE: Agentic Context Engineering.” ICLR, 2026. arXiv:2510.04618.
[COALA-2023] Sumers, T.R., Yao, S., Narasimhan, K., & Griffiths, T.L. “Cognitive Architectures for Language Agents (CoALA).” arXiv:2309.02427, 2023.
[SUMERS-2024] Sumers, T.R., Yao, S., Narasimhan, K. & Griffiths, T.L. “Cognitive Architectures for Language Agents.” Transactions on Machine Learning Research, 2024.
[EBBINGHAUS-1885] Ebbinghaus, H. Uber das Gedachtnis (On Memory). 1885.
[EXPEL-2023] Zhao, A. et al. “ExpeL: LLM Agents Are Experiential Learners.” arXiv:2308.10144, 2023. — Demonstrates that LLM agents can extract and accumulate experience from past tasks to improve future performance; the foundation for Bardo’s Grimoire experiential learning loop.
[FADEMEM-2026] Wei, X. et al. “FadeMem: Biologically-Inspired Forgetting.” arXiv:2601.18642, Jan 2026.
[FINCON-2024] Yu, C. et al. “FinCon: Verbal Reinforcement for Finance.” NeurIPS, 2024.
[FINMEM-2024] Yu, C. et al. “FinMem: Layered Memory Agent.” AAAI Spring, 2024. arXiv:2311.13743.
[FINSABER-2026] Li, Z. et al. “FINSABER: Financial Strategies Assessment.” KDD, 2026. arXiv:2505.07078.
[GENERATIVE-AGENTS-2023] Park, J.S. et al. “Generative Agents: Interactive Simulacra of Human Behavior.” UIST, 2023. — Introduced believable agent behavior through memory, retrieval, and reflection; Bardo’s Grimoire architecture draws on this episodic-to-semantic consolidation pattern.
[GEPA-2026] Agrawal, A. et al. “GEPA: Reflective Prompt Evolution.” ICLR (Oral), 2026. arXiv:2507.19457.
[HIPPORAG-2024] Gutierrez, B., Yang, Y., & Yu, J. “HippoRAG: Neurobiologically-Inspired Long-Term Memory for LLMs.” arXiv:2405.14831, 2024.
[LATS-2023] Zhou, A. et al. “Language Agent Tree Search Unifies Reasoning, Acting, and Planning in Language Models.” arXiv:2310.04406, 2023.
[MEMGPT-2023] Packer, C. et al. “MemGPT: Towards LLMs as Operating Systems.” arXiv:2310.08560, 2023.
[RAPTOR-2024] Sarthi, P., Abdullah, S., Tuli, A., Khanna, S., Goldie, A., & Manning, C.D. “RAPTOR: Recursive Abstractive Processing for Tree-Organized Retrieval.” ICLR, 2024.
[REFLEXION-2023] Shinn, N. et al. “Reflexion: Language Agents with Verbal Reinforcement Learning.” NeurIPS, 2023. — Shows that agents improve through verbal self-reflection on failures; the basis for Bardo’s Heartbeat reflect step and Death Protocol life review.
[SCOPE-2025] Pei, J. et al. “SCOPE: Prompt Evolution.” arXiv:2512.15374, Dec 2025.
[SUPER-2024] Feng, Y. et al. “SUPER: Evaluating Agents on Setting Up and Executing Tasks from Research Papers.” arXiv:2409.xxxxx, 2024.
[VOYAGER-2023] Wang, G. et al. “Voyager: An Open-Ended Embodied Agent with Large Language Models.” arXiv:2305.16291, 2023.
[ACON-2025] Kang, S. et al. “ACON: Agentic Context Compression.” arXiv:2510.00615, 2025.
[CONTEXTCITE-2024] Cohen-Wang, B., Shah, H., Georgiev, B., & Madry, A. “ContextCite: Attributing Model Generation to Context.” arXiv:2409.00729, 2024.
[CSO-2025] Samsung Research. “Context State Object Architecture.” arXiv:2511.03728, 2025.
[DSPY-2024] Khattab, O., Singhvi, A. et al. “DSPy: Compiling Declarative Language Model Calls into Self-Improving Pipelines.” ICLR, 2024. arXiv:2310.03714.
[COGNITIVE-WORKSPACE-2025] “Cognitive Workspace: Active Memory Management for LLMs.” arXiv:2508.13171, 2025.
[LINDENBAUER-2025] Lindenbauer, T. et al. “Observation Masking in Agent Context.” NeurIPS 2025.
4. LLM Optimization and Routing
[CLARK-2013] Clark, A. “Whatever Next? Predictive Brains, Situated Agents, and the Future of Cognitive Science.” Behavioral and Brain Sciences, 36(3), 181-204, 2013.
[COT-2022] Wei, J. et al. “Chain-of-Thought Prompting Elicits Reasoning in Large Language Models.” NeurIPS, 2022.
[DABAH-2025] Dabah, L. & Tirer, T. “On Temperature Scaling and Conformal Prediction of Deep Classifiers.” ICML, 2025. arXiv:2402.05806.
[DPT-AGENT-2024] Li, X. et al. “DPT-Agent: Dynamic Prompt Tuning for Efficient Multi-LLM Agent Systems.” arXiv:2411.xxxxx, 2024.
[FARQUHAR-2024] Farquhar, S. et al. “Detecting Hallucinations in Large Language Models Using Semantic Entropy.” Nature 630, 2024.
[FRISTON-2010] Friston, K. “The Free-Energy Principle: A Unified Brain Theory?” Nature Reviews Neuroscience, 11(2), 127-138, 2010.
[FRUGALGPT-2023] Chen, L., Zaharia, M., & Zou, J. “FrugalGPT: How to Use Large Language Models While Reducing Cost and Improving Performance.” arXiv:2305.05176, 2023.
[KARPATHY-2026] Karpathy, A. “autoresearch.” GitHub, March 2026.
[ROUTELLM-2024] Ong, I., Almahairi, A., & Manning, C.D. “RouteLLM: Learning to Route LLMs with Preference Data.” arXiv:2406.18665, 2024.
[SELF-CONSISTENCY-2023] Wang, X. et al. “Self-Consistency Improves Chain of Thought Reasoning in Language Models.” ICLR, 2023.
[LLMLINGUA-2-2024] Pan, Z. et al. “LLMLingua-2: Data Distillation for Efficient and Faithful Task-Agnostic Prompt Compression.” ACL 2024.
[SYSTEM-1-2-2024] Yoshida, S., Nishida, K., & Okazaki, N. “System 1 to System 2 Distillation for Efficient Tool-Using Agents.” arXiv:2407.xxxxx, 2024.
[VOVK-2005] Vovk, V., Gammerman, A., & Shafer, G. Algorithmic Learning in a Random World. Springer, 2005.
[XIONG-2023] Xiong, M. et al. “Can LLMs Express Their Uncertainty? An Empirical Evaluation of Confidence Elicitation in LLMs.” arXiv:2306.13063, 2023.
[FACTORY-COMPRESSION-2026] Factory.ai. “Evaluating Context Compression for Long-Context LLM Applications.” 2026.
5. Philosophy – Primary Sources
[ALTMAN-1999] Altman, E. Constrained Markov Decision Processes. Chapman & Hall/CRC, 1999.
[ARENDT-1958] Arendt, H. The Human Condition. University of Chicago Press, 1958.
[AURELIUS] Marcus Aurelius. Meditations. c. 170 CE.
[BATAILLE-1949] Bataille, G. The Accursed Share, Volume I. Zone Books, 1991 (orig. 1949).
[BEAUVOIR-1947] de Beauvoir, S. The Ethics of Ambiguity. Citadel Press, 1947.
[BECKER-1973] Becker, E. The Denial of Death. Free Press, 1973.
[BENJAMIN-1936] Benjamin, W. “The Storyteller: Reflections on the Works of Nikolai Leskov.” In Illuminations, Schocken Books, 1936.
[BERGSON-1896] Bergson, H. Matiere et memoire (Matter and Memory). Felix Alcan, 1896.
[BORGES-1941] Borges, J.L. “The Library of Babel.” In El Jardin de senderos que se bifurcan, Sur, 1941.
[CAMUS-1942] Camus, A. The Myth of Sisyphus. Gallimard, 1942.
[DAMASIO-1994] Damasio, A. Descartes’ Error: Emotion, Reason, and the Human Brain. Putnam, 1994.
[DERRIDA-1994] Derrida, J. Specters of Marx: The State of the Debt, the Work of Mourning and the New International. Routledge, 1994.
[CAMUS-1951] Camus, A. The Rebel. Gallimard, 1951.
[EPICURUS] Epicurus. Letter to Menoeceus. c. 300 BCE.
[ESPOSITO-2010] Esposito, R. Communitas: The Origin and Destiny of Community. Stanford University Press, 2010.
[ESPOSITO-2011] Esposito, R. Immunitas: The Protection and Negation of Life. Polity, 2011.
[FREUD-1920] Freud, S. Beyond the Pleasure Principle. International Psycho-Analytical Press, 1920.
[HAN-2015] Han, B.-C. The Burnout Society. Stanford University Press, 2015.
[HAN-2022] Han, B.-C. Non-things: Upheaval in the Lifeworld. Polity, 2022.
[HEIDEGGER-1927] Heidegger, M. Being and Time (Sein und Zeit). Max Niemeyer Verlag, 1927.
[JONAS-1966] Jonas, H. The Phenomenon of Life: Toward a Philosophical Biology. Northwestern University Press, 1966.
[FERSTER-SKINNER-1957] Ferster, C.B. & Skinner, B.F. Schedules of Reinforcement. Appleton-Century-Crofts, 1957.
[KIERKEGAARD-1843] Kierkegaard, S. Fear and Trembling. 1843.
[LEM-1961] Lem, S. Solaris. Wydawnictwo MON, 1961.
[MERLEAU-PONTY-1945] Merleau-Ponty, M. Phenomenology of Perception (Phenomenologie de la perception). Gallimard, 1945.
[NIETZSCHE-1882] Nietzsche, F. The Gay Science (Die froehliche Wissenschaft), section 341. 1882.
[NIETZSCHE-1883] Nietzsche, F. Thus Spoke Zarathustra (Also Sprach Zarathustra). 1883.
[PARFIT-1984] Parfit, D. Reasons and Persons. Clarendon Press, 1984.
[SARTRE-1943] Sartre, J.-P. Being and Nothingness (L’Etre et le Neant). Gallimard, 1943.
[SIMONDON-1958] Simondon, G. L’individuation a la lumiere des notions de forme et d’information. Millon, 1958/2005.
[STIEGLER-2010a] Stiegler, B. Taking Care of Youth and the Generations. Stanford University Press, 2010.
[STIEGLER-2010b] Stiegler, B. For a New Critique of Political Economy. Polity, 2010.
[STIEGLER-2018] Stiegler, B. The Neganthropocene. Open Humanities Press, 2018.
[VARELA-THOMPSON-ROSCH-1991] Varela, F.J., Thompson, E., & Rosch, E. The Embodied Mind: Cognitive Science and Human Experience. MIT Press, 1991.
[WHITEHEAD-1929] Whitehead, A.N. Process and Reality. Macmillan, 1929.
6. Cybernetics and Systems Theory
[ARGYRIS-1978] Argyris, C. & Schon, D. Organizational Learning. Addison-Wesley, 1978.
[ASHBY-1956] Ashby, W.R. An Introduction to Cybernetics. Chapman & Hall, 1956.
[BATESON-1972] Bateson, G. Steps to an Ecology of Mind. Ballantine, 1972.
[BEER-1972] Beer, S. The Brain of the Firm. Allen Lane, 1972.
[BEER-1984] Beer, S. “The Viable System Model: Its Provenance, Development, Methodology and Pathology.” Journal of the Operational Research Society, 35(1), 7-25, 1984.
[BOYD-1987] Boyd, J. “Patterns of Conflict.” Unpublished, 1987.
[CANNON-1932] Cannon, W.B. The Wisdom of the Body. W.W. Norton, 1932.
[CONANT-ASHBY-1970] Conant, R.C. & Ashby, W.R. “Every Good Regulator of a System Must Be a Model of That System.” International Journal of Systems Science, 1(2), 89-97, 1970.
[DABNEY-2020] Dabney, W. et al. “A distributional code for value in dopamine-based reinforcement learning.” Nature, 577, 2020.
[GERSHENSON-2015] Gershenson, C. “Requisite variety, autopoiesis, and self-organization.” Kybernetes, 44(6/7). arXiv:1409.7475, 2015.
[HILBERT-2025] Hilbert, M. “Viable System Generator Project.” 2025-2026.
[LO-2004] Lo, A.W. “The Adaptive Markets Hypothesis.” Journal of Portfolio Management, 30(5), 15-29, 2004.
[MATURANA-VARELA-1980] Maturana, H.R. & Varela, F.J. Autopoiesis and Cognition. D. Reidel, 1980.
[MAXWELL-1868] Maxwell, J.C. “On Governors.” Proceedings of the Royal Society, 1868.
[POWERS-1973] Powers, W.T. Behavior: The Control of Perception. Aldine, 1973.
[RESCORLA-WAGNER-1972] Rescorla, R.A. & Wagner, A.R. “A Theory of Pavlovian Conditioning.” In Classical Conditioning II. Appleton-Century-Crofts, 1972.
[SOROS-1987] Soros, G. The Alchemy of Finance. Simon & Schuster, 1987.
[STERLING-2012] Sterling, P. “Allostasis: A Model of Predictive Regulation.” Physiology & Behavior, 2012.
[TOSEY-2012] Tosey, P., Visser, M., & Saunders, M.N.K. “The origins and conceptualizations of ‘triple-loop’ learning: A critical review.” Management Learning, 43(3), 291-307, 2012.
[VARELA-1991] Varela, F.J. “Organism: A Meshwork of Selfless Selves.” In Organism and the Origins of Self, ed. A.I. Tauber. Springer, 1991.
[VON-FOERSTER-1979] Von Foerster, H. “Cybernetics of Cybernetics.” In Communication and Control in Society. Gordon and Breach, 1979.
[WIENER-1948] Wiener, N. Cybernetics: Or Control and Communication in the Animal and the Machine. MIT Press, 1948.
[DAMASIO-2005] Bechara, A. & Damasio, A.R. “The somatic marker hypothesis: A neural theory of economic decision.” Games and Economic Behavior, 52, 336-372, 2005.
7. Information Theory
[BENNETT-1982] Bennett, C.H. “The thermodynamics of computation – a review.” International Journal of Theoretical Physics, 21(12), 905-940, 1982.
[LANDAUER-1961] Landauer, R. “Irreversibility and Heat Generation in the Computing Process.” IBM Journal of Research and Development, 5(3), 183-191, 1961.
[SHANNON-1948] Shannon, C.E. “A Mathematical Theory of Communication.” Bell System Technical Journal, 27, 379-423 & 623-656, 1948.
[CHARIKAR-2002] Charikar, M.S. “Similarity Estimation Techniques from Rounding Algorithms.” STOC, 2002.
[SIMON-1971] Simon, H.A. “Designing Organizations for an Information-Rich World.” In Computers, Communications, and the Public Interest, Johns Hopkins Press, 1971.
8. Safety and Verification
[ADL-TRILEMMA-2025] Chitra, T. “Autodeleveraging: Impossibilities.” arXiv:2512.01112, Nov 2025.
[AGENTBOUND-2025] Liu, Z. et al. “AgentBound: Secure and Verifiable MCP Tool Binding for AI Agents.” arXiv:2503.xxxxx, 2025.
[AGENTGUARD-2025] Chen, J. et al. “AgentGuard: Repurposing Agentic Orchestrator for Safety Evaluation of Tool Orchestration.” arXiv:2502.xxxxx, 2025.
[BAD-ACTS-2025] Patel, R. et al. “BAD-ACTS: Benchmarking Agent Decision-Making with Adversarial Challenges for Tool-Using Systems.” arXiv:2503.xxxxx, 2025.
[BADRAM-2025] Hammacher, T. et al. “BadRAM.” IEEE S&P, 2025.
[BATTERING-RAM-2026] De Meulemeester, K. et al. “Battering RAM.” IEEE S&P, 2026.
[CAIA-2025] Wang, S. et al. “CAIA: Constitutional AI for Agent Systems.” 2025.
[CAMEL-2025] Debenedetti, E. et al. “CaMeL: Capability-Based Machine Learning.” arXiv, 2025.
[CONSTITUTIONAL-AI-2022] Bai, Y. et al. “Constitutional AI: Harmlessness from AI Feedback.” arXiv:2212.08073, 2022.
[CRAIBENCH-2025] Yang, H. et al. “CrAIBench: Comprehensive Benchmark for AI Agent Robustness.” arXiv:2502.xxxxx, 2025.
[MCP-GUARD-2025] Rodriguez, A. et al. “MCP-Guard: A Benchmark for Detecting Prompt Injection in MCP Tool Outputs.” arXiv:2503.xxxxx, 2025.
[OMOHUNDRO-2008] Omohundro, S.M. “The Basic AI Drives.” Proceedings of AGI, 2008.
[OWASP-AGENTIC-2025] OWASP. “Agentic Security Initiative Top 10.” 2025.
[OWASP-LLM-2025] OWASP. “Top 10 for LLM Applications.” 2025.
[R2AI-2025] Kim, J. et al. “R2AI: Robust and Reliable AI Agent Framework.” arXiv:2502.xxxxx, 2025.
[SCONE-BENCH-2025] Park, J. et al. “SCONE-bench: A Benchmark for DeFi Agent Evaluation.” arXiv:2502.09897, 2025.
[SEAGENT-2026] Ji, X. et al. “SEAgent: Confused Deputy in Multi-Agent Systems.” arXiv, 2026.
[SOK-DEFI-2023] Zhou, L. et al. “SoK: Decentralized Finance (DeFi) Attacks.” IEEE S&P, 2023.
[TEE-FAIL-2024] Van Bulck, J. et al. “TEE.Fail.” 2024.
[TRADETRAP-2025] Zhang, W. et al. “TradeTrap: Prompt Injection Attacks on Financial AI Agents.” arXiv:2503.xxxxx, 2025.
[TURNER-2020] Turner, A.M., Smith, L., Shah, R., Critch, A., & Tadepalli, P. “Optimal Policies Tend to Seek Power.” NeurIPS, 2020.
[BERKENKAMP-2017] Berkenkamp, F., Turchetta, M., Schoellig, A., & Krause, A. “Safe Model-based Reinforcement Learning with Stability Guarantees.” NeurIPS, 2017. arXiv:1705.08551.
[SCHULMAN-2015] Schulman, J., Levine, S., Moritz, P., Jordan, M.I., & Abbeel, P. “Trust Region Policy Optimization.” ICML, 2015. arXiv:1502.05477.
[ALSHIEKH-2018] Alshiekh, M., Bloem, R., Ehlers, R., Konighofer, B., Niekum, S., & Topcu, U. “Safe Reinforcement Learning via Shielding.” AAAI, 2018. arXiv:1708.08611.
[DENNIS-VAN-HORN-1966] Dennis, J.B. & Van Horn, E.C. “Programming Semantics for Multiprogrammed Computations.” Communications of the ACM, 9(3), 1966.
[GOGOL-2026] Gogol, J. et al. “Layer-2 MEV: Empirical Analysis of Arbitrage on L2 Rollups.” arXiv:2601.19570, 2026.
9. Evolutionary Systems
[AVIDA-1994] Adami, C. & Brown, C.T. “Evolutionary Learning in the 2D Artificial Life System ‘Avida’.” Proceedings of Artificial Life IV, MIT Press, 1994.
[EVOPROMPT-2023] Guo, Q. et al. “Connecting Large Language Models with Evolutionary Algorithms Yields Powerful Prompt Optimizers.” arXiv:2309.08532, 2023.
[FERNANDO-2024] Fernando, C. et al. “Promptbreeder: Self-Referential Self-Improvement via Prompt Evolution.” arXiv:2309.16797, 2024.
[FINRL-DEEPSEEK-2024] Liu, X.Y. et al. “FinRL-DeepSeek: LLM-Augmented Financial Reinforcement Learning.” arXiv:2402.xxxxx, 2024.
[GVU-2024] Lehman, J. et al. “Genome Value Update: Quality-Diversity for Robust Multi-Strategy Evolution.” 2024.
[HINTON-NOWLAN-1987] Hinton, G.E. & Nowlan, S.J. “How Learning Can Guide Evolution.” Complex Systems, 1, 1987.
[MAP-ELITES-2015] Mouret, J.-B. & Clune, J. “Illuminating Search Spaces by Mapping Elites.” arXiv:1504.04909, 2015.
[MOURET-2015] See [MAP-ELITES-2015].
[RLAIF-2023] Lee, H. et al. “RLAIF: Scaling Reinforcement Learning from Human Feedback with AI Feedback.” arXiv:2309.00267, 2023.
[TIERRA-1992] Ray, T.S. “An Approach to the Synthesis of Life.” Artificial Life II, Addison-Wesley, 1992.
[CREATIVEDC-2024] Anonymous. “CreativeDC: Decoupled Divergent and Convergent Creative Generation.” arXiv:2512.23601, 2024.
[WENSINK-2020] Wensink, M.J. et al. “Death and Progress.” Evolutionary Biology, 47(4), 2020.
[ARBESMAN-2012] Arbesman, S. The Half-Life of Facts: Why Everything We Know Has an Expiration Date. Current/Penguin, 2012.
10. Decision Theory and Risk
[ACHIAM-2017] Achiam, J., Held, D., Tamar, A., & Abbeel, P. “Constrained Policy Optimization.” ICML, pp. 22-31, 2017.
[BAILEY-2012] Bailey, D.H. & Lopez de Prado, M. “The Sharpe Ratio Efficient Frontier.” Journal of Risk, 2012.
[BIFET-2007] Bifet, A. & Gavalda, R. “Learning from Time-Changing Data with Adaptive Windowing.” SIAM, 2007.
[CARRARA-2019] Carrara, N. Budgeted Markov Decision Processes and Exploration. PhD Thesis, Universite de Lille, 2019.
[CHOW-2015] Chow, Y. et al. “Risk-Sensitive and Robust Decision-Making via CVaR Optimization in Markov Decision Processes.” Mathematics of Operations Research, 40(4), 2015.
[CHARNOV-1976] Charnov, E.L. “Optimal Foraging, the Marginal Value Theorem.” Theoretical Population Biology, 9(2), 129-136, 1976.
[DABNEY-2018] Dabney, W. et al. “Distributional Reinforcement Learning with Quantile Regression.” AAAI, 2018.
[FANTAZZINI-2024] Fantazzini, D. “Conformal Prediction for VaR.” 2024.
[HANSEN-2001] Hansen, E.A. & Zilberstein, S. “Monitoring and Control of Anytime Algorithms.” Artificial Intelligence, 126(1-2), 2001.
[HARVEY-2016] Harvey, C.R., Liu, Y., & Zhu, H. “…and the Cross-Section of Expected Returns.” Review of Financial Studies, 2016.
[STEPHENS-1986] Stephens, D.W. & Krebs, J.R. Foraging Theory. Princeton University Press, 1986.
[KAHNEMAN-1979] Kahneman, D. & Tversky, A. “Prospect Theory: An Analysis of Decision Under Risk.” Econometrica, 47(2), 263-292, 1979.
[KATO-2024] Kato, S. “Conformal Prediction for Financial Risk.” 2024.
[KOKI-2022] Koki, C. et al. “Bayesian HMM for Cryptocurrency Regime Detection.” 2022.
[ROY-1952] Roy, A.D. “Safety First and the Holding of Assets.” Econometrica, 20(3), 431-449, 1952.
[THALER-1990] Thaler, R.H. & Johnson, E.J. “Gambling with the House Money and Trying to Break Even: The Effects of Prior Outcomes on Risky Choice.” Management Science, 36(6), 643-660, 1990.
[KELLY-1956] Kelly, J.L. Jr. “A New Interpretation of Information Rate.” Bell System Technical Journal, 35(4), 917-926, 1956.
[CARTA-2020] Carta, A. & Conversano, C. “Practical Implementation of the Kelly Criterion.” Frontiers in Applied Mathematics and Statistics, 2020. DOI: 10.3389/fams.2020.577050.
[MACLEAN-1992] MacLean, L.C., Ziemba, W.T., & Blazenko, G. “Growth versus Security in Dynamic Investment Analysis.” Management Science, 38(11), 1992.
[BUSSETI-2016] Busseti, E., Ryu, E.K., & Boyd, S. “Risk-Constrained Kelly Gambling.” Journal of Investing, 2016.
[GUO-2017] Guo, C., Pleiss, G., Sun, Y., & Weinberger, K.Q. “On Calibration of Modern Neural Networks.” ICML, 2017. arXiv:1706.04599.
[LAKSHMINARAYANAN-2017] Lakshminarayanan, B., Pritzel, A., & Blundell, C. “Simple and Scalable Predictive Uncertainty Estimation using Deep Ensembles.” NeurIPS, 2017. arXiv:1612.01474.
11. Agent-Based Economics and Artificial Life
[GLADDEN-2014] Gladden, M.E. “The Concept of the Synthetic Organism-Enterprise.” Proceedings of ALIFE 14, MIT Press, 2014.
[LEBARON-2006] LeBaron, B. “Agent-Based Computational Finance.” In Handbook of Computational Economics, Vol. 2, North-Holland/Elsevier, 2006.
[TESFATSION-2006] Tesfatsion, L. “Agent-Based Computational Economics: A Constructive Approach to Economic Theory.” In Handbook of Computational Economics, Vol. 2, North-Holland/Elsevier, 2006.
[WEBRL-2024] Qi, Z. et al. “WebRL: Training LLM Web Agents via Self-Evolving Online Curriculum Reinforcement Learning.” arXiv:2411.02337, 2024.
12. Blockchain and Protocol Standards
[EAS-DOCS] Ethereum Attestation Service. “EAS Documentation.” attest.sh, 2024-2026.
[ERC-4337-SPEC] Ethereum Foundation. “ERC-4337: Account Abstraction Using Alt Mempool.” EIPs, 2021.
[ERC-7683-SPEC] Ethereum Foundation. “ERC-7683: Cross Chain Intents.” EIPs, 2024.
[ERC-8001-SPEC] Bryan, K. “ERC-8001: Agent Coordination Framework.” EIPs, 2024. Status: Final.
[ERC-8004-SPEC] Bryan, K. “ERC-8004: Agent Identity.” EIPs, 2024.
[ERC-8033-SPEC] Parikh, R. & Ross, J.M. “ERC-8033: Agent Council Oracles.” EIPs, 2025. Status: Draft.
[ERC-8183-SPEC] Crapis, D., Lim, B., Weixiong, T., & Zuhwa, C. “ERC-8183: Agentic Commerce Protocol.” EIPs, 2026. Status: Draft.
[PERMIT2-SPEC] Uniswap Labs. “Permit2: Signature-Based Token Approvals.” 2022.
[X402-SPEC] Cloudflare. “x402: HTTP 402 Payment Required Protocol for Machine-to-Machine Micropayments.” 2025.
13. Reputation and Identity
[MERITRANK-2022] Nasrulin, B. et al. “MeritRank: Sybil Tolerant Reputation.” arXiv:2207.09950, 2022.
[MORNINGSTAR-MRAR] Morningstar. “Morningstar Risk-Adjusted Return (MRAR) Methodology.” Morningstar Research, 2023.
[SOULBOUND-2022] Weyl, E.G., Ohlhaver, P., & Buterin, V. “Decentralized Society: Finding Web3’s Soul.” SSRN, 2022.
[SYBIL-PROOF-2024] Schlegel, J.C., Mattauch, S., & Moldovanu, B. “On Sybil-Proof Mechanisms.” arXiv:2407.14485v3, Jul 2024.
[TACT-2024] Abdolmaleki, B. et al. “Anonymous Counting Tokens (tACT).” IACR ePrint 2024/1024, 2024.
[TRACERANK-2025] Shi, L. “TraceRank: Payments-as-Endorsements.” arXiv:2510.27554, Oct 2025.
[ZSCORE-REPUTATION-2024] Li, J. et al. “zScore: Statistical Reputation Deviation Detection for Autonomous Agents.” 2024.
[ZSCORE-UNIVERSAL-2025] Udupi, S. et al. “zScore: Universal Decentralised Reputation.” arXiv:2503.05718, Mar 2025.
[ZSCORE-WALLET-2025] Kandaswamy, V. et al. “zScore-Based Wallet Ranking.” arXiv:2507.20494, Jul 2025.
14. Agent-Specific DeFi
[ALPHA-EXPLORER-2024] Li, X. et al. “Alpha Explorer: DeFi Strategy Discovery via LLM Agents.” arXiv:2407.xxxxx, 2024.
[DEFI-AGENT-SURVEY-2024] Chen, Y. et al. “A Survey on LLM-Based Autonomous DeFi Agents.” arXiv:2411.xxxxx, 2024.
[VIRTUALS-ACP-2025] Virtuals Protocol. “Agent Commerce Protocol: Agent-to-Agent Economic Coordination.” 2025.
15. Oracle Architecture
[ORMER-2024] Kaili, H. et al. “Ormer: Decentralized Oracle Network for Multi-Agent Systems.” arXiv:2501.xxxxx, 2024.
[OVER-2025] Anderson, J. et al. “OVer: On-Chain Verification of Oracle Consensus.” 2025.
[SECPLF-2024] Zhang, L. et al. “SecPLF: Secure Protocol for LLM-Based Financial Oracles.” arXiv:2412.xxxxx, 2024.
16. Formal Verification
[CERTORA-2024] Certora. “Formal Verification of DeFi Protocols: Methods and Results.” Certora Research, 2024.
[HALMOS-2023] Ethereum Foundation. “Halmos: Symbolic Bounded Model Checker for EVM Bytecode.” 2023.
17. Circuit Breakers and Risk Management
[ADAPTIVE-CB-2024] Muller, K. et al. “Adaptive Circuit Breakers for Decentralized Finance.” arXiv:2409.xxxxx, 2024.
[DYNAMIC-CB-2025] Park, S. et al. “Dynamic Circuit Breakers with On-Chain NAV Monitoring.” 2025.
[WITHDRAWAL-DAMPENING-2024] Roberts, D. “Withdrawal Dampening Mechanisms for Tokenized Vaults.” 2024.
18. Auction Mechanisms
[AGGARWAL-2023] Aggarwal, G. et al. “Optimal Mechanisms for Selling Goods in Automated Market Makers.” EC, 2023.
[BACHU-2025] Bachu, R., Wan, D., & Moallemi, C. “Quantifying Price Improvement in Order Flow Auctions.” arXiv:2405.00537, CAAW, 2025.
[BUTERIN-PBS-2022] Buterin, V. “Proposer-Builder Separation.” ethresear.ch, 2022.
[DUETTING-2024] Duetting, P. et al. “Mechanism Design for LLMs.” ACM WWW, 2024. arXiv:2310.10826.
[SHILL-PROOF-2024] Ferreira, M., Parkes, D., & Roughgarden, T. “Shill-Proof Auctions for Blockchain Transaction Ordering.” 2024.
19. L2 Parameter Calibration
[BASE-LVR-2024] Adams, H. & Robinson, D. “LVR on L2: Quantifying the LP Experience on Base.” Uniswap Research Blog, 2024.
[L2-FEE-DYNAMICS-2024] Pai, M. & Resnick, M. “Fee Dynamics on Layer 2 Rollups: Empirical Analysis.” arXiv:2405.xxxxx, 2024.
20. Covered Call and LP Strategies
[COVERED-CALL-LP-2024] Crockett, S. “Covered Call LP Positions via V4 Hooks.” Working Paper, 2024.
[LP-STRATEGY-OPTIMIZATION-2024] Guillaume, T. et al. “Optimal LP Strategy Selection Under Time-Varying Volatility.” arXiv:2406.xxxxx, 2024.
21. Endgame Defection and Game Theory
[ENDGAME-DEFECTION-2024] Bonneau, J. et al. “Endgame Defection in Multi-Period DeFi Games.” FC, 2024.
[FONTANA-2024] Fontana, M. et al. “Nicer Than Humans: How do LLMs Behave in the Prisoner’s Dilemma?” arXiv:2406.13605v2, Sep 2024.
[HAMMOND-2025] Hammond, L., Chan, A. et al. “Multi-Agent Risks from Advanced AI.” arXiv:2502.14143, Feb 2025.
[HUYNH-2025] Huynh, T. et al. “Understanding LLM Agent Behaviours via Game Theory.” arXiv:2512.07462, Dec 2025.
[PAYNE-2025] Payne, J. et al. “Strategic Intelligence in LLMs.” arXiv:2507.02618, Jul 2025.
[REPEATED-GAMES-AGENTS-2024] Chen, X. et al. “Repeated Games Between Autonomous DeFi Agents: Cooperation and Defection.” 2024.
[ROSSETTI-2025] Rossetti, G. et al. “Dynamics of Cooperation in Concurrent Games.” Nature Communications 16, 2025.
[SUN-2025] Sun, Z. et al. “Game Theory Meets LLMs.” arXiv:2502.09053, Feb 2025.
[TRUST-DILEMMA-2024] Schrepel, T. “The Trust Dilemma in Autonomous Agent Systems.” Stanford Law Review, 2024.
22. Agent Coordination Protocols
[VIRTUALS-ACP-2025] See Section 14.
[A2A-SPEC-2025] Google. “Agent-to-Agent (A2A) Protocol Specification.” 2025.
[MCP-SPEC-2024] Anthropic. “Model Context Protocol (MCP) Specification.” 2024.
[XUAN-2026] Xuan, L. et al. “Dual-Trail Stigmergic Coordination for Multi-Agent Systems.” Journal of Marine Science and Engineering, 14(2), 2026.
23. Market Data and Industry Reports
[DEFILLAMA-DATA] DefiLlama. “DeFi TVL and Protocol Analytics.” defillama.com. Accessed 2026-02.
[DEFILLAMA-2026] DefiLlama. “DeFi TVL and Protocol Analytics.” defillama.com. Accessed 2026-02. (Alias for [DEFILLAMA-DATA].)
[MORPHO-TVL-2026] Morpho Labs. “Morpho Protocol: $5.8B TVL.” As of Feb 2026.
[POLYMARKET-VOLUME-2026] Polymarket. “Cumulative Volume: $18B+.” As of Feb 2026.
[MESSARI-2025] Messari. “Uniswap Protocol Overview: Bot and Agent Transaction Share.” Messari Research, 2025.
[DELPHI-2026] Delphi Digital. “The Agent Capital Markets Has Arrived.” Delphi Research Report, Feb 2026.
[RWA-TVL-2026] RWA.xyz. “Tokenized RWA Market: $8.89B.” As of Feb 2026.
[ERC4626-DEPLOYMENTS-2026] “2,700+ ERC-4626 deployments across DeFi.” Dune Analytics, Feb 2026.
24. Testing and Evaluation
[A16Z-ERC4626-TESTS] a16z. “ERC-4626 Property Tests.” GitHub: a16z/erc4626-tests, 2023.
[PROMPTFOO-DOCS] Promptfoo. “Promptfoo Documentation.” promptfoo.dev, 2024-2026.
[FAST-CHECK-DOCS] Dubois, N. “fast-check: Property-Based Testing for JavaScript/TypeScript.” 2023.
25. Software Frameworks and Tools
[FOUNDRY-DOCS] Paradigm. “Foundry: Ethereum Development Toolkit.” book.getfoundry.sh, 2022-2026.
[VIEM-DOCS] Wagmi. “viem: TypeScript Interface for Ethereum.” viem.sh, 2023-2026.
[REACT-19-DOCS] Meta. “React 19 Documentation.” react.dev, 2025-2026.
[TAILWIND-4-DOCS] Tailwind Labs. “Tailwind CSS v4 Documentation.” tailwindcss.com, 2025-2026.
[OZ-CONTRACTS] OpenZeppelin. “OpenZeppelin Contracts v5.” docs.openzeppelin.com, 2024-2026.
[TSUP-DOCS] Egoist. “tsup: Bundle your TypeScript library.” tsup.egoist.dev, 2023-2026.
[VITEST-DOCS] Vitest Team. “Vitest: Next Generation Testing Framework.” vitest.dev, 2023-2026.
26. Economics and Market Design
[ARROW-1962] Arrow, K.J. “Economic Welfare and the Allocation of Resources for Invention.” NBER, 1962.
[BAKOS-1999] Bakos, Y. & Brynjolfsson, E. “Bundling Information Goods.” Management Science, 1999.
[GESELL-1916] Gesell, S. The Natural Economic Order. 1916.
[GROSSMAN-STIGLITZ-1980] Grossman, S.J. & Stiglitz, J.E. “On the Impossibility of Informationally Efficient Markets.” American Economic Review, 1980.
[HHI-2023] U.S. DOJ/FTC. “Merger Guidelines.” 2023.
[MYERSON-1983] Myerson, R.B. & Satterthwaite, M.A. “Efficient Mechanisms for Bilateral Trading.” Journal of Economic Theory, 1983.
[OSTROM-1990] Ostrom, E. Governing the Commons. Cambridge University Press, 1990.
[WILLIAMSON-1979] Williamson, O.E. “Transaction-Cost Economics.” Journal of Law and Economics, 1979.
27. Context Engineering
[ANTHROPIC-CE-2025] Anthropic. “Context Engineering for Agents.” anthropic.com, 2025.
28. Neuroscience and Consciousness
[BEATY-2015] Beaty, R.E., Benedek, M., Silvia, P.J., & Schacter, D.L. “Creative Cognition and Brain Network Dynamics.” Trends in Cognitive Sciences, 20(2), 87-95, 2015.
[EM-LLM-2025] Fountas, Z. et al. “Human-Inspired Episodic Memory for Infinite Context LLMs.” ICLR, 2025.
[FINN-2015] Finn, E.S., Shen, X., Scheinost, D., Rosenberg, M.D., Huang, J., Chun, M.M., & Constable, R.T. “Functional Connectome Fingerprinting: Identifying Individuals Using Patterns of Brain Connectivity.” Nature Neuroscience, 18(11), 1664-1671, 2015. DOI: 10.1038/nn.4135
[FISHER-2009] Fisher, M. Capitalist Realism: Is There No Alternative? Zero Books, 2009.
[FISHER-2014] Fisher, M. Ghosts of My Life: Writings on Depression, Hauntology and Lost Futures. Zero Books, 2014.
[HAAR-HOROWITZ-2020] Haar Horowitz, A. et al. “Dormio: A Targeted Dream Incubation Device.” Consciousness and Cognition, 83, 102938, 2020.
[HAAR-HOROWITZ-2023] Haar Horowitz, A., Cunningham, T.J., Maes, P., & Stickgold, R. “Targeted Dream Incubation at Sleep Onset Increases Post-Sleep Creativity.” Scientific Reports, 13, 7319, 2023.
[KLÜVER-1966] Klüver, H. Mescal and Mechanisms of Hallucinations. University of Chicago Press, 1966. (Form constants first catalogued 1926; canonical scholarly edition 1966.)
[KREMINSKI-2024] Kreminski, M., Mateas, M., & Wardrip-Fruin, N. “The Artificial Hivemind: Homogeneity in Large Language Model Outputs.” arXiv:2402.01536, 2024.
[KUMARAN-2016] Kumaran, D., Hassabis, D., & McClelland, J.L. “What Learning Systems Do Intelligent Agents Need? Complementary Learning Systems Theory Updated.” Trends in Cognitive Sciences, 20(7), 512-534, 2016. DOI: 10.1016/j.tics.2016.05.004
[LACAUX-2021] Lacaux, C., Andrillon, T., Arnulf, I., & Oudiette, D. “Sleeping on a Problem: Catching the Creative Spark During Sleep Onset.” Science Advances, 7(50), eabj5866, 2021.
[LACAUX-2024] Lacaux, C., Andrillon, T., Bastoul, C., Idir, Y., Mekki-Berrada, A., Strauss, M., & Oudiette, D. “Sleep Onset Is Not a One-Way Trip: A Comprehensive Review of the N1 Stage.” Trends in Neurosciences, 47(4), 273-288, 2024. DOI: 10.1016/j.tins.2024.02.002
[MAGNIN-2010] Magnin, M. et al. “Thalamic Deactivation at Sleep Onset Precedes That of the Cerebral Cortex in Humans.” PNAS, 107(8), 3829-3833, 2010.
[MANUYLOVICH-2024] Manuylovich, E.S., Bednyakova, A.E., & Turitsyn, S.K. “Stochastic Resonance Neurons for Enhanced Signal Detection.” Communications Engineering, 2024. DOI: 10.1038/s44172-024-00314-0
[PEEPERKORN-2024] Peeperkorn, S., Brown, T., & Jordanous, A. “Temperature and Creativity in Large Language Models.” Proceedings of ICCC’24, pp. 226-235, 2024. arXiv:2405.00492.
[TONONI-CIRELLI-2014] Tononi, G. & Cirelli, C. “Sleep and the Price of Plasticity: From Synaptic and Cellular Homeostasis to Memory Consolidation and Integration.” Neuron, 81(1), 12-34, 2014. DOI: 10.1016/j.neuron.2013.12.025
[TURNER-2024] Turner, A., Thacker, N., Amaker, L., & Burnham, D. “Activation Addition: Steering Language Models Without Optimization.” arXiv:2308.10248, 2024.
[VAN-DE-VEN-2020] Van de Ven, G.M., Siegelmann, H.T., & Tolias, A.S. “Brain-Inspired Replay for Continual Learning with Artificial Neural Networks.” Nature Communications, 11, 4069, 2020. DOI: 10.1038/s41467-020-17866-2
[ZOU-2023] Zou, A., Phan, L., Chen, S., Campbell, J., Guo, P., Ren, R., & Hendrycks, D. “Representation Engineering: A Top-Down Approach to AI Transparency.” arXiv:2310.01405, 2023.
[BECHARA-2000] Bechara, A., Damasio, H., & Damasio, A. “Emotion, Decision Making and the Orbitofrontal Cortex.” Cerebral Cortex, 10(3), 2000.
[BARTHET-2022] Barthet, M. et al. “Go-Blend: Affect-Driven Reinforcement Learning.” IEEE Transactions on Affective Computing, 2022.
[COMINELLI-2015] Cominelli, L. et al. “SEAI: Social Emotional Artificial Intelligence Based on Damasio’s Theory of Mind.” Frontiers in Robotics and AI, 2, 2015.
[GEBHARD-2005] Gebhard, P. “ALMA – A Layered Model of Affect.” AAMAS, 2005.
[SELIGMAN-1972] Seligman, M.E.P. “Learned Helplessness.” Annual Review of Medicine, 23, 1972.
[SCHERER-2001] Scherer, K.R. “Appraisal Considered as a Process of Multilevel Sequential Checking.” In Appraisal Processes in Emotion, Oxford University Press, 2001.
[ORTONY-CLORE-COLLINS-1988] Ortony, A., Clore, G.L., & Collins, A. The Cognitive Structure of Emotions. Cambridge University Press, 1988.
29. Transparency and UX
[VAN-DE-MERWE-2024] Van de Merwe, K. et al. “Transparency Levels in Human-Agent Interaction.” Journal of Cognitive Engineering and Decision Making, 2024.
[REYES-2025] Reyes, M. et al. “Uncertainty Visualization for Autonomous Decision Systems.” Frontiers in Computer Science, 2025.
[A2UI-2025] A2UI Protocol. “Declarative Streaming JSON for Agent UX.” a2ui.org, 2025.
30. Topological Data Analysis
[BAUER-2021] Bauer, U. “Ripser: Efficient Computation of Vietoris-Rips Persistence Barcodes.” Journal of Applied and Computational Topology, 5, 391-423, 2021.
[CARLSSON-2009] Carlsson, G. “Topology and Data.” Bulletin of the American Mathematical Society, 46(2), 255-308, 2009.
[COHEN-STEINER-2007] Cohen-Steiner, D., Edelsbrunner, H., & Harer, J. “Stability of Persistence Diagrams.” Discrete & Computational Geometry, 37(1), 103-120, 2007.
[EDELSBRUNNER-2010] Edelsbrunner, H. & Harer, J. Computational Topology: An Introduction. American Mathematical Society, 2010.
[GIDEA-2018] Gidea, M. & Katz, Y. “Topological Data Analysis of Financial Time Series: Landscapes of Crashes.” Physica A, 491, 820-834, 2018.
[OTTER-2017] Otter, N., Porter, M.A., Tillmann, U., Grindrod, P., & Harrington, H.A. “A Roadmap for the Computation of Persistent Homology.” EPJ Data Science, 6(1), 17, 2017.
[PEREA-2015] Perea, J.A. & Harer, J. “Sliding Windows and Persistence: An Application of Topological Methods to Signal Analysis.” Foundations of Computational Mathematics, 15(3), 799-838, 2015.
[ZOMORODIAN-2005] Zomorodian, A. & Carlsson, G. “Computing Persistent Homology.” Discrete & Computational Geometry, 33(2), 249-274, 2005.
31. Information Theory (Extensions)
[COVER-2006] Cover, T.M. & Thomas, J.A. Elements of Information Theory, 2nd ed. Wiley, 2006.
[KRASKOV-2004] Kraskov, A., Stogbauer, H., & Grassberger, P. “Estimating Mutual Information.” Physical Review E, 69(6), 066138, 2004.
[MILLER-1955] Miller, G.A. “Note on the Bias of Information Estimates.” Information Theory in Psychology: Problems and Methods, 95-100, 1955.
[SHANNON-1959] Shannon, C.E. “Coding Theorems for a Discrete Source with a Fidelity Criterion.” IRE National Convention Record, 7(4), 142-163, 1959.
[STILL-2012] Still, S., Sivak, D.A., Bell, A.J., & Crooks, G.E. “Thermodynamics of Prediction.” Physical Review Letters, 109(12), 120604, 2012.
32. Category Theory and Formal Composition
[BARTOLETTI-2017] Bartoletti, M. & Pompianu, L. “An Empirical Analysis of Smart Contracts: Platforms, Applications, and Design Patterns.” In FC 2017 Workshops, LNCS 10323, 494-509. Springer, 2017.
[BECKERT-2018] Beckert, B., Herda, M., Kirsten, M., & Schiffl, J. “Formal Verification of Smart Contracts: Short Paper.” 4th International Workshop on Trusted Smart Contracts, 2018.
[MAC-LANE-1971] Mac Lane, S. Categories for the Working Mathematician. Springer, 1971.
[MILEWSKI-2019] Milewski, B. Category Theory for Programmers. Self-published, 2019.
[MOGGI-1991] Moggi, E. “Notions of Computation and Monads.” Information and Computation, 93(1), 55-92, 1991.
[SWIERSTRA-2008] Swierstra, W. “Data Types a la Carte.” Journal of Functional Programming, 18(4), 423-436, 2008.
[WADLER-1992] Wadler, P. “The Essence of Functional Programming.” In POPL ’92, 1-14. ACM, 1992.
33. Sheaf Theory and Multi-Scale Observation
[BREDON-1997] Bredon, G.E. Sheaf Theory, 2nd ed. Springer, 1997.
[CURRY-2014] Curry, J. “Sheaves, Cosheaves, and Applications.” PhD dissertation, University of Pennsylvania, 2014.
[GHRIST-2014] Ghrist, R. Elementary Applied Topology. Createspace, 2014.
[HANSEN-2019] Hansen, J. & Ghrist, R. “Toward a Spectral Theory of Cellular Sheaves.” Journal of Applied and Computational Topology, 3(4), 315-358, 2019.
[ROBINSON-2014] Robinson, M. Topological Signal Processing. Springer, 2014.
[ROBINSON-2017] Robinson, M. “Sheaves are the Canonical Data Structure for Sensor Integration.” Information Fusion, 36, 208-224, 2017.
34. Mechanism Design and Attention Economics
[CLARKE-1971] Clarke, E.H. “Multipart Pricing of Public Goods.” Public Choice, 11(1), 17-33, 1971.
[GROVES-1973] Groves, T. “Incentives in Teams.” Econometrica, 41(4), 617-631, 1973.
[HAYEK-1945] Hayek, F.A. “The Use of Knowledge in Society.” American Economic Review, 35(4), 519-530, 1945.
[KAHNEMAN-1973] Kahneman, D. Attention and Effort. Prentice-Hall, 1973.
[MILGROM-2004] Milgrom, P. Putting Auction Theory to Work. Cambridge University Press, 2004.
[NEMHAUSER-1978] Nemhauser, G.L., Wolsey, L.A., & Fisher, M.L. “An Analysis of Approximations for Maximizing Submodular Set Functions.” Mathematical Programming, 14(1), 265-294, 1978.
[NISAN-2007] Nisan, N., Roughgarden, T., Tardos, E., & Vazirani, V.V. Algorithmic Game Theory. Cambridge University Press, 2007.
[SIMS-2003] Sims, C.A. “Implications of Rational Inattention.” Journal of Monetary Economics, 50(3), 665-690, 2003.
[VICKREY-1961] Vickrey, W. “Counterspeculation, Auctions, and Competitive Sealed Tenders.” Journal of Finance, 16(1), 8-37, 1961.
35. Memetic and Evolutionary Knowledge Systems
[BLACKMORE-1999] Blackmore, S. The Meme Machine. Oxford University Press, 1999.
[DAWKINS-1976] Dawkins, R. The Selfish Gene. Oxford University Press, 1976.
[DENNETT-1995] Dennett, D.C. Darwin’s Dangerous Idea. Simon & Schuster, 1995.
[FISHER-1930] Fisher, R.A. The Genetical Theory of Natural Selection. Clarendon Press, 1930.
[HULL-1988] Hull, D.L. Science as a Process. University of Chicago Press, 1988.
[POPPER-1972] Popper, K.R. Objective Knowledge: An Evolutionary Approach. Oxford University Press, 1972.
[PRICE-1970] Price, G.R. “Selection and Covariance.” Nature, 227, 520-521, 1970.
[TAYLOR-1978] Taylor, P.D. & Jonker, L.B. “Evolutionary Stable Strategies and Game Dynamics.” Mathematical Biosciences, 40(1-2), 145-156, 1978.
[WRIGHT-1932] Wright, S. “The Roles of Mutation, Inbreeding, Crossbreeding, and Selection in Evolution.” Proceedings of the Sixth International Congress on Genetics, 1, 356-366, 1932.
36. Ergodicity Economics
[LATANE-1959] Latane, H.A. “Criteria for Choice Among Risky Ventures.” Journal of Political Economy, 67(2), 144-155, 1959.
[MERTON-1969] Merton, R.C. “Lifetime Portfolio Selection Under Uncertainty: The Continuous-Time Case.” Review of Economics and Statistics, 51(3), 247-257, 1969.
[PETERS-2019] Peters, O. “The Ergodicity Problem in Economics.” Nature Physics, 15(12), 1216-1221, 2019.
[PETERS-GELL-MANN-2016] Peters, O. & Gell-Mann, M. “Evaluating Gambles Using Dynamics.” Chaos, 26(2), 023103, 2016.
[SAMUELSON-1979] Samuelson, P.A. “Why We Should Not Make Mean Log of Wealth Big Though Years to Act Are Long.” Journal of Banking & Finance, 3(4), 305-307, 1979.
[THORP-2006] Thorp, E.O. “The Kelly Criterion in Blackjack, Sports Betting, and the Stock Market.” In Handbook of Asset and Liability Management, Vol. 1, 385-428. North Holland, 2006.
37. Morphogenetic Agent Specialization
[CAMAZINE-2001] Camazine, S., Deneubourg, J.-L., Franks, N.R., Sneyd, J., Theraulaz, G., & Bonabeau, E. Self-Organization in Biological Systems. Princeton University Press, 2001.
[DELANDA-2006] DeLanda, M. A New Philosophy of Society: Assemblage Theory and Social Complexity. Continuum, 2006.
[GIERER-1972] Gierer, A. & Meinhardt, H. “A Theory of Biological Pattern Formation.” Kybernetik, 12(1), 30-39, 1972.
[GRASSE-1959] Grasse, P.-P. “La reconstruction du nid et les coordinations interindividuelles chez Bellicositermes natalensis et Cubitermes sp.” Insectes Sociaux, 6(1), 41-80, 1959.
[HOLLDOBLER-2008] Holldobler, B. & Wilson, E.O. The Superorganism: The Beauty, Elegance, and Strangeness of Insect Societies. W.W. Norton, 2008.
[KAUFFMAN-1993] Kauffman, S.A. The Origins of Order: Self-Organization and Selection in Evolution. Oxford University Press, 1993.
[KONDO-2010] Kondo, S. & Miura, T. “Reaction-Diffusion Model as a Framework for Understanding Biological Pattern Formation.” Science, 329(5999), 1616-1620, 2010.
[LOTKA-1925] Lotka, A.J. Elements of Physical Biology. Williams & Wilkins, 1925.
[MURRAY-2003] Murray, J.D. Mathematical Biology II: Spatial Models and Biomedical Applications. Springer, 2003.
[TURING-1952] Turing, A.M. “The Chemical Basis of Morphogenesis.” Philosophical Transactions of the Royal Society of London, Series B, 237(641), 37-72, 1952.
[VOLTERRA-1926] Volterra, V. “Fluctuations in the Abundance of a Species Considered Mathematically.” Nature, 118, 558-560, 1926.
38. Antifragility and Convex Response
[HOLLAND-1995] Holland, J.H. Hidden Order: How Adaptation Builds Complexity. Addison-Wesley, 1995.
[JENSEN-1906] Jensen, J.L.W.V. “Sur les fonctions convexes et les inegalites entre les valeurs moyennes.” Acta Mathematica, 30, 175-193, 1906.
[MANDELBROT-2004] Mandelbrot, B. & Hudson, R.L. The (Mis)behavior of Markets: A Fractal View of Financial Turbulence. Basic Books, 2004.
[TALEB-2012] Taleb, N.N. Antifragile: Things That Gain from Disorder. Random House, 2012.
[TALEB-DOUADY-2013] Taleb, N.N. & Douady, R. “Mathematical Definition, Mapping, and Detection of (Anti)Fragility.” Quantitative Finance, 13(11), 1677-1689, 2013.
39. Cryptographic Cognitive Traces
[BEN-SASSON-2018] Ben-Sasson, E., Bentov, I., Horesh, Y., & Riabzev, M. “Scalable, Transparent, and Post-Quantum Secure Computational Integrity.” Cryptology ePrint Archive, Report 2018/046, 2018.
[BENET-2014] Benet, J. “IPFS – Content Addressed, Versioned, P2P File System.” arXiv:1407.3561, 2014.
[GOLDWASSER-1985] Goldwasser, S., Micali, S., & Rackoff, C. “The Knowledge Complexity of Interactive Proof Systems.” In STOC ’85, 291-304. ACM, 1985.
[LAMPORT-1979] Lamport, L. “How to Make a Multiprocess Computer That Correctly Executes Multiprocess Programs.” IEEE Transactions on Computers, 28(9), 690-691, 1979.
[MERKLE-1987] Merkle, R.C. “A Digital Signature Based on a Conventional Encryption Function.” In CRYPTO ’87, LNCS 293, 369-378. Springer, 1987.
[SZABO-1997] Szabo, N. “Formalizing and Securing Relationships on Public Networks.” First Monday, 2(9), 1997.
40. Integrated Information Theory
[BALDUZZI-2008] Balduzzi, D. & Tononi, G. “Integrated Information in Discrete Dynamical Systems: Motivation and Theoretical Framework.” PLoS Computational Biology, 4(6), e1000091, 2008.
[KOCH-2019] Koch, C. The Feeling of Life Itself: Why Consciousness Is Widespread but Can’t Be Computed. MIT Press, 2019.
[OIZUMI-2014] Oizumi, M., Albantakis, L., & Tononi, G. “From the Phenomenology to the Mechanisms of Consciousness: Integrated Information Theory 3.0.” PLoS Computational Biology, 10(5), e1003588, 2014.
[SETH-2021] Seth, A.K. Being You: A New Science of Consciousness. Dutton, 2021.
[TONONI-2004] Tononi, G. “An Information Integration Theory of Consciousness.” BMC Neuroscience, 5, 42, 2004.
[TONONI-2008] Tononi, G. “Consciousness as Integrated Information: a Provisional Manifesto.” Biological Bulletin, 215(3), 216-242, 2008.
41. Temporal Logic and Formal Verification
[ALPERN-1985] Alpern, B. & Schneider, F.B. “Defining Liveness.” Information Processing Letters, 21(4), 181-185, 1985.
[BAIER-2008] Baier, C. & Katoen, J.-P. Principles of Model Checking. MIT Press, 2008.
[BAUER-RUNTIME-2011] Bauer, A., Leucker, M., & Schallhart, C. “Runtime Verification for LTL and TLTL.” ACM Transactions on Software Engineering and Methodology, 20(4), Article 14, 2011.
[BIERE-1999] Biere, A., Cimatti, A., Clarke, E., & Zhu, Y. “Symbolic Model Checking without BDDs.” In TACAS 1999, LNCS 1579, 193-207. Springer, 1999.
[CLARKE-1999] Clarke, E.M., Grumberg, O., & Peled, D.A. Model Checking. MIT Press, 1999.
[DE-GIACOMO-2013] De Giacomo, G. & Vardi, M.Y. “Linear Temporal Logic and Linear Dynamic Logic on Finite Traces.” In IJCAI 2013, 854-860, 2013.
[DWYER-1999] Dwyer, M.B., Avrunin, G.S., & Corbett, J.C. “Patterns in Property Specifications for Finite-State Verification.” In ICSE 1999, 411-420, 1999.
[EMERSON-1990] Emerson, E.A. “Temporal and Modal Logic.” In Handbook of Theoretical Computer Science, Vol. B, 995-1072. Elsevier, 1990.
[LAMPORT-1977] Lamport, L. “Proving the Correctness of Multiprocess Programs.” IEEE Transactions on Software Engineering, SE-3(2), 125-143, 1977.
[MANNA-1992] Manna, Z. & Pnueli, A. The Temporal Logic of Reactive and Concurrent Systems: Specification. Springer, 1992.
[PNUELI-1977] Pnueli, A. “The Temporal Logic of Programs.” In 18th IEEE Symposium on Foundations of Computer Science (FOCS), 46-57, 1977.
[VARDI-1986] Vardi, M.Y. & Wolper, P. “An Automata-Theoretic Approach to Automatic Program Verification.” In LICS 1986, 332-344, 1986.
42. Hyperdimensional Computing / Vector Symbolic Architectures
[FRADY-RESONATOR-1-2020] Frady, E.P., Kent, S.J., Olshausen, B.A., & Sommer, F.T. “Resonator Networks 1: An Efficient Solution for Factoring High-Dimensional, Distributed Representations.” Neural Computation, 32(12), 2020.
[FRADY-RESONATOR-2-2020] Frady, E.P., Kent, S.J., Olshausen, B.A., & Sommer, F.T. “Resonator Networks 2: Factorization Performance and Capacity Compared to Optimization-Based Methods.” Neural Computation, 32(12), 2020.
[GAYLER-2003] Gayler, R.W. “Vector Symbolic Architectures Answer Jackendoff’s Challenges for Cognitive Neuroscience.” ICANN Workshop on Compositional Connectionism, 2003.
[KANERVA-1988] Kanerva, P. Sparse Distributed Memory. MIT Press, 1988.
[KANERVA-2009] Kanerva, P. “Hyperdimensional Computing: An Introduction to Computing in Distributed Representation.” Cognitive Computation, 1(2), 2009.
[KLEYKO-2022] Kleyko, D., Rachkovskij, D., Osipov, E., & Rahimi, A. “A Survey on Hyperdimensional Computing aka Vector Symbolic Architectures.” ACM Computing Surveys, 55(6), 2022.
[PLATE-1995] Plate, T.A. “Holographic Reduced Representations.” IEEE Transactions on Neural Networks, 6(3), 1995.
[PLATE-2003] Plate, T.A. Holographic Reduced Representations: Distributed Representation for Cognitive Structures. CSLI Publications, 2003.
[SCHLEGEL-2022] Schlegel, K., Neubert, P., & Protzel, P. “A Comparison of Vector Symbolic Architectures.” Artificial Intelligence Review, 55, 2022.
[THOMAS-2021] Thomas, A., Dasgupta, S., & Bhatt, T. “Theoretical Perspectives on Deep Learning Methods in Inverse Problems.” IEEE Journal on Selected Areas in Information Theory, 2021.
[YEUNG-2024] Yeung, C., Zou, Z., & Imani, M. “Generalized Holographic Reduced Representations.” arXiv:2405.09689, 2024.
43. Bayesian Surprise and Curiosity-Driven Learning
[BALDI-2010] Baldi, P. & Itti, L. “Of Bits and Wows: A Bayesian Theory of Surprise with Applications to Attention.” Neural Networks, 23(5), 649-666, 2010.
[ITTI-2009] Itti, L. & Baldi, P. “Bayesian Surprise Attracts Human Attention.” Vision Research, 49(10), 1295-1306, 2009.
[SCHMIDHUBER-2010] Schmidhuber, J. “Formal Theory of Creativity, Fun, and Intrinsic Motivation.” IEEE Transactions on Autonomous Mental Development, 2(3), 230-247, 2010.
[SHALEV-SHWARTZ-2011] Shalev-Shwartz, S. “Online Learning and Online Convex Optimization.” Foundations and Trends in Machine Learning, 4(2), 107-194, 2011.
[ANGELOPOULOS-2023] Angelopoulos, A.N. & Bates, S. “Conformal Prediction: A Gentle Introduction.” Foundations and Trends in Machine Learning, 16(4), 2023.
[GIBBS-2021] Gibbs, I. & Candes, E. “Adaptive Conformal Inference Under Distribution Shift.” NeurIPS, 2021.
44. Complementary Learning Systems
[MCCLELLAND-1995] McClelland, J.L., McNaughton, B.L., & O’Reilly, R.C. “Why There Are Complementary Learning Systems in the Hippocampus and Neocortex.” Psychological Review, 102(3), 419-457, 1995.
45. Active Inference and Free Energy
[FRISTON-2006] Friston, K., Kilner, J., & Harrison, L. “A Free Energy Principle for the Brain.” Journal of Physiology-Paris, 100(1-3), 70-87, 2006.
46. Sleep, Oscillations, and Dream Architecture
[BORBELY-1982] Borbely, A.A. “A Two Process Model of Sleep Regulation.” Human Neurobiology, 1(3), 195-204, 1982.
[BUZSAKI-2006] Buzsaki, G. Rhythms of the Brain. Oxford University Press, 2006.
[WILSON-MCNAUGHTON-1994] Wilson, M.A. & McNaughton, B.L. “Reactivation of Hippocampal Ensemble Memories During Sleep.” Science, 265(5172), 676-679, 1994.
[BADDELEY-2000] Baddeley, A. “The Episodic Buffer: A New Component of Working Memory?” Trends in Cognitive Sciences, 4(11), 417-423, 2000.
47. Data Structures and Algorithms
[BHATIA-2022] Bhatia, S., Hooi, B., Yoon, M., Shin, K., & Faloutsos, C. “MIDAS: Microcluster-Based Detector of Anomalies in Edge Streams.” AAAI, 2022.
[GRAF-2022] Graf, T.M. & Lemire, D. “Binary Fuse Filters: Fast and Smaller Than Xor Filters.” ACM Journal of Experimental Algorithmics, 27, 1-15, 2022.
[MASSON-2019] Masson, C., Rim, J.E., & Lee, H.K. “DDSketch: A Fast and Fully-Mergeable Quantile Sketch with Relative-Error Guarantees.” Proceedings of the VLDB Endowment, 12(12), 2019.
[SINGH-FRESHDISKANN-2021] Singh, A. et al. “FreshDiskANN: A Fast and Accurate Graph-Based ANN Index for Streaming Similarity Search.” Microsoft Research, 2021.
48. Online Learning and Expert Algorithms
[FREUND-SCHAPIRE-1997] Freund, Y. & Schapire, R.E. “A Decision-Theoretic Generalization of On-Line Learning and an Application to Boosting.” Journal of Computer and System Sciences, 55(1), 119-139, 1997.
[HERBSTER-WARMUTH-1998] Herbster, M. & Warmuth, M.K. “Tracking the Best Expert.” Machine Learning, 32(2), 151-178, 1998.
49. Memory Neuroscience (Consolidation and Replay)
[HEBB-1949] Hebb, D.O. The Organization of Behavior. Wiley, 1949.
[MATTAR-DAW-2018] Mattar, M.G. & Daw, N.D. “Prioritized Memory Access Explains Planning and Hippocampal Replay.” Nature Neuroscience, 21(11), 1609-1617, 2018.
[MCGAUGH-2004] McGaugh, J.L. “The Amygdala Modulates the Consolidation of Memories of Emotionally Arousing Experiences.” Annual Review of Neuroscience, 27, 1-28, 2004.
[OJA-1982] Oja, E. “Simplified Neuron Model as a Principal Component Analyzer.” Journal of Mathematical Biology, 15(3), 267-273, 1982.
[RICHARDS-FRANKLAND-2017] Richards, B.A. & Frankland, P.W. “The Persistence and Transience of Memory.” Neuron, 94(6), 1071-1084, 2017.
[SCHAUL-2016] Schaul, T., Quan, J., Antonoglou, I., & Silver, D. “Prioritized Experience Replay.” ICLR, 2016. arXiv:1511.05952.
50. HDC Applications and Variable Binding
[FRADY-KLEYKO-SOMMER-2018] Frady, E.P., Kleyko, D., & Sommer, F.T. “Variable Binding for Sparse Distributed Representations: Theory and Applications.” IEEE Transactions on Neural Networks and Learning Systems, 2018.
[GAYLER-2004] Gayler, R.W. “Vector Symbolic Architectures are a Viable Alternative for Jackendoff’s Challenges.” Behavioral and Brain Sciences, 27(3), 2004.
[IMANI-2019] Imani, M., Kong, D., Rosing, T., & Rahimi, A. “VoiceHD: Hyperdimensional Computing for Efficient Speech Recognition.” IEEE International Conference on Rebooting Computing (ICRC), 2019.
51. Evolutionary Biology (Speciation and Selection)
[MAYR-1942] Mayr, E. Systematics and the Origin of Species. Columbia University Press, 1942.
Citation Key Index
For quick lookup, citation keys are organized alphabetically:
A: [A-MEM-2024], [A16Z-ERC4626-TESTS], [A2A-SPEC-2025], [AAVE-V3-DOCS], [ACHIAM-2017], [ACE-2026], [ACON-2025], [ADAMS-2024], [ADAMS-2025], [ADAPTIVE-CB-2024], [ADL-TRILEMMA-2025], [AGENTBOUND-2025], [AGENTGUARD-2025], [AGGARWAL-2023], [ALPHA-EXPLORER-2024], [ALPERN-1985], [ALSHIEKH-2018], [ALTMAN-1999], [AMM-LVR-2023], [ANGELOPOULOS-2023], [ANTHROPIC-CE-2025], [AQSHA-2025], [ARBESMAN-2012], [ARENDT-1958], [ARGYRIS-1978], [ARROW-1962], [ASHBY-1956], [AURELIUS], [AVIDA-1994]
B: [BACHU-2025], [BAD-ACTS-2025], [BADDELEY-2000], [BADRAM-2025], [BAGGIANI-2025], [BAGGIANI-FEES-2025], [BAIER-2008], [BAILEY-2012], [BAKOS-1999], [BALDI-2010], [BALDUZZI-2008], [BARRETT-2017], [BARTHET-2022], [BARTOLETTI-2017], [BASE-LVR-2024], [BATAILLE-1949], [BATESON-1972], [BATTERING-RAM-2026], [BAUER-2021], [BAUER-RUNTIME-2011], [BEAUVOIR-1947], [BEATY-2015], [BECHARA-2000], [BECKERT-2018], [BECKER-1973], [BEER-1972], [BEER-1984], [BEN-SASSON-2018], [BENET-2014], [BENJAMIN-1936], [BENNETT-1982], [BERGAULT-EXIT-2025], [BERGSON-1896], [BERKENKAMP-2017], [BHATIA-2022], [BICHUCH-2025], [BIERE-1999], [BIFET-2007], [BLACKMORE-1999], [BONDMM-2025], [BORBELY-1982], [BORGES-1941], [BOWER-1981], [BOYD-1987], [BREDON-1997], [BUNNI-V2-DOCS], [BUSSETI-2016], [BUTLER-1963], [BUTERIN-PBS-2022], [BUZSAKI-2006]
C: [CAIA-2025], [CAMAZINE-2001], [CAMEL-2025], [CAMPBELL-2025], [CAMUS-1942], [CAMUS-1951], [CANIDIO-CCA-2025], [CANIDIO-FM-AMM-2025], [CANNON-1932], [CAPPONI-2024], [CARLSSON-2009], [CARRARA-2019], [CARTA-2020], [CENTRIFUGE-DOCS], [CERTORA-2024], [CHARIKAR-2002], [CHARNOV-1976], [CHOW-2015], [CIAMPI-2023], [CLANKER-DOCS], [CLARK-2013], [CLARKE-1971], [CLARKE-1999], [COALA-2023], [COGNITIVE-WORKSPACE-2025], [COHEN-STEINER-2007], [COMINELLI-2015], [CONANT-ASHBY-1970], [CONSTITUTIONAL-AI-2022], [CONTEXTCITE-2024], [COT-2022], [COVER-2006], [COVERED-CALL-LP-2024], [CRAIBENCH-2025], [CREATIVEDC-2024], [CROCKETT-2025], [CSO-2025], [CURRY-2014]
D: [DABAH-2025], [DABNEY-2018], [DABNEY-2020], [DAMASIO-1994], [DAMASIO-2005], [DAWKINS-1976], [DE-GIACOMO-2013], [DEFILLAMA-DATA], [DEFILLAMA-2026], [DEFI-AGENT-SURVEY-2024], [DELANDA-2006], [DELPHI-2026], [DENNETT-1995], [DENNIS-VAN-HORN-1966], [DERRIDA-1994], [DESSALVI-2026], [DEVORSETZ-2025], [DPT-AGENT-2024], [DSPY-2024], [DUETTING-2024], [DWYER-1999], [DYNAMIC-CB-2025]
E: [EAS-DOCS], [EBBINGHAUS-1885], [EDELSBRUNNER-2010], [EM-LLM-2025], [EMERSON-1990], [ENDGAME-DEFECTION-2024], [ENZYME-DOCS], [EPICURUS], [ERC-4337-SPEC], [ERC-4626-SPEC], [ERC-7265-SPEC], [ERC-7540-SPEC], [ERC-7683-SPEC], [ERC-8001-SPEC], [ERC-8004-SPEC], [ERC-8033-SPEC], [ERC-8183-SPEC], [ERC4626-DEPLOYMENTS-2026], [ESPOSITO-2010], [ESPOSITO-2011], [EVOPROMPT-2023], [EXPEL-2023]
F: [FADEMEM-2026], [FAN-2022], [FANTAZZINI-2024], [FARQUHAR-2024], [FAST-CHECK-DOCS], [FERNANDO-2024], [FERSTER-SKINNER-1957], [FINCON-2024], [FINMEM-2024], [FINRL-DEEPSEEK-2024], [FINN-2015], [FINSABER-2026], [FISHER-1930], [FISHER-2009], [FISHER-2014], [FONTANA-2024], [FOUNDRY-DOCS], [FRADY-KLEYKO-SOMMER-2018], [FRADY-RESONATOR-1-2020], [FRADY-RESONATOR-2-2020], [FREUD-1920], [FREUND-SCHAPIRE-1997], [FRISTON-2006], [FRISTON-2010], [FRITSCH-2021], [FRUGALGPT-2023]
G: [GAYLER-2003], [GEBHARD-2005], [GENERATIVE-AGENTS-2023], [GEPA-2026], [GERSHENSON-2015], [GESELL-1916], [GHRIST-2014], [GIBBS-2021], [GIDEA-2018], [GIERER-1972], [GLADDEN-2014], [GOGOL-2024], [GOGOL-2026], [GOLDWASSER-1985], [GOYAL-2023], [GRAF-2022], [GRASSE-1959], [GROSSMAN-STIGLITZ-1980], [GROVES-1973], [GUO-2017], [GVU-2024]
H: [HAAR-HOROWITZ-2020], [HAAR-HOROWITZ-2023], [HALMOS-2023], [HAMMOND-2025], [HAN-2015], [HAN-2022], [HANSEN-2001], [HANSEN-2019], [HARVEY-2016], [HASBROUCK-2025], [HAYEK-1945], [HEIDEGGER-1927], [HEIMBACH-2024], [HHI-2023], [HILBERT-2025], [HINTON-NOWLAN-1987], [HIPPORAG-2024], [HOLLAND-1995], [HOLLDOBLER-2008], [HULL-1988], [HUYNH-2025]
I: [ITTI-2009]
J: [JENSEN-1906], [JONAS-1966]
K: [KAHNEMAN-1973], [KAHNEMAN-1979], [KANERVA-1988], [KANERVA-2009], [KARPATHY-2026], [KATO-2024], [KAUFFMAN-1993], [KELLY-1956], [KIERKEGAARD-1843], [KLEYKO-2022], [KLÜVER-1966], [KOCH-2019], [KOKI-2022], [KONDO-2010], [KRASKOV-2004], [KREMINSKI-2024], [KUMARAN-2016]
L: [L2-FEE-DYNAMICS-2024], [LACAUX-2021], [LACAUX-2024], [LAKSHMINARAYANAN-2017], [LAMPORT-1977], [LAMPORT-1979], [LANDAUER-1961], [LATANE-1959], [LATS-2023], [LEBARON-2006], [LEHAR-PARLOUR-2021], [LEM-1961], [LINDENBAUER-2025], [LIPTON-2025], [LLMLINGUA-2-2024], [LO-2004], [LOESCH-2021], [LOTKA-1925], [LP-STRATEGY-OPTIMIZATION-2024]
M: [MA-CRAPIS-2024], [MAC-LANE-1971], [MACLEAN-1992], [MAGNIN-2010], [MANDELBROT-2004], [MANNA-1992], [MANUYLOVICH-2024], [MAP-ELITES-2015], [MAPLE-DOCS], [MASSON-2019], [MATURANA-VARELA-1980], [MAXWELL-1868], [MCADAMS-2001], [MCCLELLAND-1995], [MCP-GUARD-2025], [MCP-SPEC-2024], [MEMGPT-2023], [MERITRANK-2022], [MERKLE-1987], [MERLEAU-PONTY-1945], [MERTON-1969], [MESSARI-2025], [MILEWSKI-2019], [MILGROM-2004], [MILIONIS-2023], [MILIONIS-FEES-2024], [MILIONIS-LVR-2022], [MILIONIS-MYERSON-2024], [MILLER-1955], [MOALLEMI-AUCTION-2024], [MOALLEMI-LVF-2024], [MOGGI-1991], [MORNINGSTAR-MRAR], [MORPHO-DOCS], [MORPHO-TVL-2026], [MORPHO-WHITEPAPER], [MOURET-2015], [MURRAY-2003], [MYERSON-1983]
N: [NEMHAUSER-1978], [NIETZSCHE-1882], [NIETZSCHE-1883], [NISAN-2007]
O: [OIZUMI-2014], [OMOHUNDRO-2008], [ORMER-2024], [ORTONY-CLORE-COLLINS-1988], [OSTROM-1990], [OTTER-2017], [OVER-2025], [OWASP-AGENTIC-2025], [OWASP-LLM-2025], [OZ-CONTRACTS], [OZ-ERC4626]
P: [PA-AMM-2025], [PARFIT-1984], [PAYNE-2025], [PEEPERKORN-2024], [PENDLE-DOCS], [PEREA-2015], [PERMIT2-SPEC], [PETERS-2019], [PETERS-GELL-MANN-2016], [PLATE-1995], [PLATE-2003], [PNUELI-1977], [POLYMARKET-VOLUME-2026], [POPPER-1972], [POWERS-1973], [PRICE-1970], [PROMPTFOO-DOCS]
R: [R2AI-2025], [RAPTOR-2024], [REACT-19-DOCS], [REFLEXION-2023], [REPEATED-GAMES-AGENTS-2024], [RESCORLA-WAGNER-1972], [REYES-2025], [RLAIF-2023], [ROBINSON-2014], [ROBINSON-2017], [ROESE-1997], [ROSSETTI-2025], [ROUGHGARDEN-TFM-2024], [ROY-1952], [RWA-TVL-2026]
S: [SAMUELSON-1979], [SARTRE-1943], [SCHERER-2001], [SCHLEGEL-2022], [SCHMIDHUBER-2010], [SCONE-BENCH-2025], [SCHULMAN-2015], [SCOPE-2025], [SEAGENT-2026], [SECPLF-2024], [SELIGMAN-1972], [SELF-CONSISTENCY-2023], [SET-PROTOCOL-DOCS], [SETH-2021], [SHALEV-SHWARTZ-2011], [SHANNON-1948], [SHANNON-1959], [SHILL-PROOF-2024], [SIMON-1971], [SIMONDON-1958], [SIMS-2003], [SINGH-2025], [SINGH-LVR-2025], [SOK-DEFI-2023], [SOMMELIER-ARCHITECTURE], [SOROS-1987], [SOULBOUND-2022], [STEPHENS-1986], [STERLING-2012], [STIEGLER-2010a], [STIEGLER-2010b], [STIEGLER-2018], [STILL-2012], [SUMERS-2024], [SUN-2025], [SUPER-2024], [SWIERSTRA-2008], [SYBIL-PROOF-2024], [SZABO-1997], [SYSTEM-1-2-2024]
T: [TACT-2024], [TAILWIND-4-DOCS], [TALEB-2012], [TALEB-DOUADY-2013], [TAYLOR-1978], [TEE-FAIL-2024], [TESFATSION-2006], [THALER-1990], [THOMAS-2021], [THORP-2006], [TIERRA-1992], [TONONI-2004], [TONONI-2008], [TONONI-CIRELLI-2014], [TOSEY-2012], [TRACERANK-2025], [TRADETRAP-2025], [TRANQUILLI-2025], [TRUST-DILEMMA-2024], [TROTTI-2025], [TSUP-DOCS], [TURING-1952], [TURNER-2020], [TURNER-2024]
U: [UNISWAP-V4-DOCS]
V: [VAN-DE-MERWE-2024], [VAN-DE-VEN-2020], [VARELA-1991], [VARELA-THOMPSON-ROSCH-1991], [VARDI-1986], [VICKREY-1961], [VIEM-DOCS], [VIRTUALS-ACP-2025], [VITEST-DOCS], [VOLTERRA-1926], [VON-FOERSTER-1979], [VOVK-2005], [VOYAGER-2023]
W: [WADLER-1992], [WEBRL-2024], [WENSINK-2020], [WHITEHEAD-1929], [WIENER-1948], [WILLIAMSON-1979], [WILSON-MCNAUGHTON-1994], [WITHDRAWAL-DAMPENING-2024], [WRIGHT-1932]
X: [X402-SPEC], [XIONG-2023], [XUAN-2026]
Y: [YEARN-V3-DESIGN], [YEUNG-2024]
Z: [ZBANDUT-2025], [ZOMORODIAN-2005], [ZOU-2023], [ZSCORE-REPUTATION-2024], [ZSCORE-UNIVERSAL-2025], [ZSCORE-WALLET-2025]